Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs71559050 | chr6:27797416 | C/A | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
KIRP | rs71559054 | chr6:27896799 | A/C | 5.53E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
KIRP | rs71559067 | chr6:27994416 | A/T | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
KIRP | rs71559070 | chr6:28038929 | G/A | 4.75E-7 | 213 | 15.88 | 16.68 | 9.77 | KM Plot |
KIRP | rs71559072 | chr6:28089481 | C/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
KIRP | rs71578847 | chr5:79932504 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs71601339 | chr5:176544496 | A/G | 5.79E-7 | 211 | 14.97 | 20.72 | 9.77 | KM Plot |
KIRP | rs71601343 | chr5:176632107 | G/A | 5.72E-7 | 210 | 15.2 | 20.53 | 9.77 | KM Plot |
KIRP | rs71601344 | chr5:176633493 | G/A | 5.72E-7 | 210 | 15.2 | 20.53 | 9.77 | KM Plot |
KIRP | rs71603550 | chr5:79902408 | TTAATAA/T | 7.49E-7 | 208 | 17.17 | 14.87 | 7.47 | KM Plot |
KIRP | rs71603555 | chr5:79931745 | CCTTTT/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs71607327 | chr4:76606000 | T/C | 8.55E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
KIRP | rs71644402 | chr1:212711790 | C/T | 3.22E-7 | 214 | 16.43 | 16.53 | 10.63 | KM Plot |
KIRP | rs7170353 | chr15:27031278 | C/T | 0.000141 | 212 | 9.92 | 20.27 | 15.33 | KM Plot |
KIRP | rs7171402 | chr15:27031492 | A/G | 0.000145 | 210 | 9.92 | 19.83 | 15.88 | KM Plot |